Software

New tools and functions in data-out activities at Protein Data Bank Japan (PDBj)
The Protein Data Bank Japan (PDBj), a member of the worldwide Protein Data Bank (wwPDB), accepts and processes the deposited data of …
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Protein Data Bank Japan (PDBj): Updated user interfaces, resource description framework, analysis tools for large structures
The Protein Data Bank Japan (PDBj, http://pdbj.org), a member of the worldwide Protein Data Bank (ww- PDB), accepts and processes the …
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Molmil: A molecular viewer for the PDB and beyond
We have developed a new platform-independent web-based molecular viewer using JavaScript and WebGL. The molecular viewer, Molmil, has …
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Publication of nuclear magnetic resonance experimental data with semantic web technology and the application thereof to biomedical research of proteins
Background: The nuclear magnetic resonance (NMR) spectroscopic data for biological macromolecules archived at the BioMagResBank (BMRB) …
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Functional structural motifs for protein-ligand, protein-protein, and protein-nucleic acid interactions and their connection to supersecondary structures
Protein functions are mediated by interactions between proteins and other molecules. One useful approach to analyze protein functions …
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Protein Data Bank Japan (PDBj): Maintaining a structural data archive and resource description framework format
The Protein Data Bank Japan (PDBj, http://pdbj.org) is a member of the worldwide Protein Data Bank (wwPDB) and accepts and processes …
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